Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Friday, April 19 2024

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Submission

23536 : NAGLU

Your submitted sequence: sequence (720 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PMODELLER (only used 32 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	pgenthreader.3	69.294	0.056	0.101	0.282	1GQI_A	3.30.379.10.1.1 3.20.20.80.14.2 3.90.1330.10.1.1
2	ffas.6	-0.102E+02	0.065	0.097	0.224	1HP4_A	3.20.20.80.31.1 3.30.379.10.3.1
3	pgenthreader.2	70.584	0.087	0.134	0.323	1JAK_A	3.20.20.80.31.1 3.30.379.10.3.1
4	ffas.5	-0.102E+02	0.031	0.075	0.253	1KWG_A	3.20.20.80.21.1 3.40.50.880.7.1 2.60.40.1180.21.1
5	pgenthreader.7	60.955	0.066	0.123	0.352	1L8N_A	3.20.20.80.14.1
6	rpsblast.2	6e-22	0.079	0.104	0.205	1L8N_A	3.20.20.80.14.1
7	pgenthreader.8	59.748	0.020	0.087	0.353	1QGR_A	1.25.10.10.12.1
8	pgenthreader.10	57.869	0.020	0.076	0.298	1WA5_C	N/A
9	ffas.3	-0.114E+02	0.061	0.102	0.265	2EPK_X	N/A
10	pgenthreader.5	66.850	0.080	0.150	0.428	2EPL_X	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.