C; An alignment in the PIR format

>P1;pdb1wa5_C.ent
structure:pdb1wa5_C.ent: 1  : C : 959  :  : : : :
MSDLETVAKFLAESVIASTAKTSERNLRQLETQDGFGLTLLHVIASTNLPLSTRLAGALFFKNFIKRKWVDENGNHLLPANNVELIKKEIVPLMISLPNNLQVQIGEAISSIADSDFPDRWPTLLSDLASRLSNDDMVTNKGVLTVAHSIFKRWRPLFRSDELFLEIKLVLDVFTAPFLNLLKTVDEQITANEKASLNILFDVLLVLIKLYYDFNCQDIP--------------------------------------------EFFEDNIQVGMGIFHKYLSYSNPLLEHASVLIKVKSSIQELVQLYTTRY-EDVFGPMINEFIQITWNLLTSISNQPKYDILVSKSLSFLTAVTRIPKYFEIFNNESAMNNITEQIILPNVTLREEDVELFEDDPIEYIRRDLEGTRRRACTDFLKELKEKNEVLVTNIFLAHMKGFVDQYMSNWKFKDLYIYLFTALAINGNITNAGVSSTNNLLN-----VVDFFTKEIAPDLTSNNIPHIILRVDAIKYIYTFRNQLTKAQLIELMPILATFLQTDEYVVYTYAAITIEKILTIRESNT-----SPAFIFHKEDISNSTEILLKNLIALILKH---------GSSPEKLAEN-----EFLMRSIFRVLQTSEDSIQPLFPQLLAQFIEIVTIMAKNPSN-----PRFTHYTFESIGAILNYT-QRQNLPLLVDSMMPTFLTVFSEDIQEFIPYVFQIIAFVVEQSATIPESI--KPLAQPLLAPNVWELKGNIPAVTRLLKSFIKTDSSIFPD------LVPVLGIFQRLIASKAYEVHGFDLLEHIMLLIDMNRLRPYIKQIAVLLLQRLQN----SKTERYVKKLTVFFGLISNKLGSDFLIHFIDEV-----QDGLFQQIWGNFIITTLPTIGNLLDRKIALIGVLNMVINGQFFQSKYPTLISSTMNSIIETASSQSIANLKNDYVEEISTFGSHFSKLVSISEKPFDPLPEIDVNNGVRLYVAEALNKYNAISGNTFLNTILPQLTQENQVKLNQLLVG*

>P1;pcons23536.1WA5_C.pgenthreader.10
sequence:pcons23536.1WA5_C.pgenthreader.10: . : . : . : : : : :
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DEAREAAAVRALVARLLGPGPAADFSVSVERALAAKPGLDTYSLGGGGAARVRVRGSTGVAAAAGLHRYLRDFCGCHVAWSGSQLRLPRPLPAVPGELTEATPNRYRYYQNVCTQSYSFVWWDWARWEREIDWMALNGINLALAWSGQEAIWQRVYLALGLTQAEINEFFTG--------PAFLAWGRMGNLHTWDGPLPPSWHIKQLYLQH------RVLDQMRSFGMTPVLPAFAGHVPEAVTRVFPQ-------VNVTKMGSWGHFNCSYSCSFLLAPEDPIFPIIGSLFLRELIKEFGTDHI-----------YGADTFNEMQ--------------PPSSEPSYLAAATTAVYEAMTAVDTEAVWLLQGWLFQHQPQFWG---PAQIRAVLGAVPRGRLLVLDLFAESQPVYTRTASFQGQPFIWCMLHNFGGNHGLFG---ALEAVNGGPEAARLFPNSTMVGTGMAPEGISQNEVVYSLMAELGWRKDPVPDLAAWVTSFAARRYGVSHPDAGAAWRLLLRSVYNCSGEACRGHNRSPLVRRPSLQMNTSIWYNRSDVFEAWRLLLTSAPSLATSPAFRYDLLDLTRQAVQELV-----SLYYEEARSAYLSKELASLLRAGGVLAYELLPALDEVLASDSRFLLGSWLEQARAAAVSEAEADFYEQNSRYQLTLWGPEGNILDYANKQLAGLVANYY-TPRWRLFLEALVDSVAQGIPFQQHQ---FDKNVFQLEQAFVLSKQ------------------------------RYPSQPRGD-TVDLAKKIFLKYYPRWVAGSW---------------------*