Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Thursday, April 25 2024

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Submission

23726 : SP|P23363.1|BDNF_RAT RECNAME: FULL=BRAIN-DERIVED NEUROTROPHIC FACTOR

Your submitted sequence: sequence (59 aa)

Ready methods: PCONS PMODELLER rpsblast
Queued locally: blast pgenthreader psipred ffas lomets itasser hhpred2

rpsblast

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	ProQ / ProQresSum	Template	CATH	Alignment
1	N/A	200	N/A	N/A	N/A	N/A	2hcz_X	2.40.40.40.1.1 2.60.40.760.1.2	N/A
2	N/A	385	N/A	N/A	N/A	N/A	1bhp_A	N/A	N/A
3	N/A	391	N/A	N/A	N/A	N/A	2plh_A	N/A	N/A
4	N/A	500	N/A	N/A	N/A	N/A	3szs_E	N/A	N/A
5	N/A	638	N/A	N/A	N/A	N/A	3c8p_B	N/A	N/A
6	N/A	744	N/A	N/A	N/A	N/A	2v9b_B	N/A	N/A
7	N/A	766	N/A	N/A	N/A	N/A	1wuw_A	3.30.1350.10.2.2	N/A
8	N/A	826	N/A	N/A	N/A	N/A	2x3h_C	N/A	N/A

References

Marchler-Bauer A et al (2002) "CDD: a database of conserved domain alignments with links to domain three-dimensional structure." Nucleic Acids Res 30(1), 281-283. [LINK]