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© Arne Elofsson

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Your submitted sequence: sequence (213 aa)

Ready methods: PCONS PMODELLER pgenthreader rpsblast
Queued locally: itasser

PMODELLER (only used 20 models from 2 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)
RankModelMethod ScorePconsPcombProQ2ProQ / ProQresSumTemplateCATHAlignment
1
pgenthreader.9
61.4390.2070.2460.404 1BJF_A1.10.238.10.6.2 1.10.238.10.11.2
2
rpsblast.6
6e-100.1870.2090.297 1FPW_A1.10.238.10.6.3 1.10.238.10.11.1
3
pgenthreader.7
63.3310.2210.2650.439 1S1E_A1.10.238.10.40.1
4
rpsblast.8
1e-080.1400.1350.114 1SNL_A1.10.238.10.51.1
5
rpsblast.10
2e-070.0860.0980.147 1WLZ_CN/A
6
rpsblast.3
6e-130.2560.2720.334 1XO5_A1.10.238.10.42.1
7
pgenthreader.4
69.0520.2570.3160.552 2BEC_AN/A
8
rpsblast.1
2e-170.3610.3750.431 2BEC_AN/A
9
pgenthreader.1
87.2570.2720.3440.632 2CT9_A1.10.238.10.41.2
10
rpsblast.4
1e-100.3420.3760.511 2CT9_B1.10.238.10.41.2
 
References
Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.
 
 
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