Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Friday, April 19 2024

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Submission

23577 : RBD domain cov2

Your submitted sequence: sequence (59 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: itasser
Queued at server: blast sam-t02 fugue lomets hhpred2

PMODELLER (only used 29 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	pgenthreader.8	19.483	0.043	0.069	0.174	1B4I_A	N/A
2	pgenthreader.3	21.263	0.050	0.073	0.163	1CIX_A	4.10.40.20.2.1
3	pgenthreader.2	21.919	0.062	0.075	0.127	1I25_A	N/A
4	pgenthreader.5	14.050	0.054	0.080	0.184	1KRN_A	N/A
5	pgenthreader.6	14.050	0.062	0.093	0.219	1KRN_A	N/A
6	rpsblast.3	0.43	0.050	0.057	0.084	1QZV_U	N/A
7	pgenthreader.9	19.459	0.048	0.040	0.010	1U19_A	1.20.1070.10.6.1
8	pgenthreader.10	19.456	0.061	0.060	0.055	2CUG_A	N/A
9	pgenthreader.1	41.679	0.331	0.381	0.582	2GHV_C	N/A
10	ffas.3	-0.241E+02	0.133	0.228	0.608	2GHV_E	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.