Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Saturday, April 20 2024

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Submission

23576 : A

Your submitted sequence: sequence (344 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: itasser
Queued at server: blast sam-t02 fugue lomets hhpred2

PMODELLER (only used 40 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.15	-0.105E+03	0.490	0.510	0.592	1I57_A	3.90.190.10.2.1
2	pgenthreader.4	155.433	0.565	0.576	0.619	1LAR_A	3.90.190.10.3.1 3.90.190.10.4.2
3	rpsblast.1	1e-36	0.496	0.494	0.484	1LAR_A	3.90.190.10.3.1 3.90.190.10.4.2
4	rpsblast.4	1e-34	0.532	0.536	0.550	1LAR_A	3.90.190.10.3.1 3.90.190.10.4.2
5	ffas.16	-0.105E+03	0.572	0.583	0.629	1RPM_A	3.90.190.10.3.3
6	rpsblast.7	3e-30	0.514	0.520	0.546	1RPM_A	3.90.190.10.3.3
7	ffas.11	-0.106E+03	0.572	0.578	0.601	1YFO_A	3.90.190.10.3.2
8	pgenthreader.7	150.090	0.558	0.572	0.629	1YGR_A	3.90.190.10.3.4
9	rpsblast.6	4e-31	0.578	0.590	0.639	1YGU_B	3.90.190.10.3.4
10	rpsblast.10	2e-28	0.315	0.343	0.457	1ZC0_A	3.90.190.10.5.1

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.