Pcons.net Protein Structure Prediction Meta Server Thursday, August 13 2020
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© Arne Elofsson

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23576 : A

Your submitted sequence: sequence (344 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: itasser
Queued at server: blast sam-t02 fugue lomets hhpred2

PCONS (only used 40 models from 3 methods the score is NOT RELIABLE, models are sorted by Pcomb score)
RankModelMethod ScorePconsPcombProQ2ProQ / ProQresSumTemplateCATHAlignment
1
pgenthreader.6
152.4780.5840.5970.651 2NLK_AN/A
2
pgenthreader.8
149.6420.5840.5910.620 3I36_AN/A
3
rpsblast.6
4e-310.5780.5900.639 1YGU_B3.90.190.10.3.4
4
pgenthreader.3
155.4420.5770.5860.621 2H4V_AN/A
5
pgenthreader.9
147.2790.5750.5850.624 3S3E_AN/A
6
ffas.10
-0.106E+030.5690.5830.641 3I36_AN/A
7
ffas.16
-0.105E+030.5720.5830.629 1RPM_A3.90.190.10.3.3
8
pgenthreader.10
143.9340.5840.5830.579 2OOQ_AN/A
9
ffas.12
-0.106E+030.5740.5790.598 2NV5_AN/A
10
ffas.11
-0.106E+030.5720.5780.601 1YFO_A3.90.190.10.3.2
 
References
Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.
 
 
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