Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Thursday, April 25 2024

Main Menu

Submission

23575 : id:23567:1-23,121-379

Your submitted sequence: sequence (282 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: itasser
Queued at server: blast sam-t02 fugue lomets hhpred2

PMODELLER (only used 30 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	pgenthreader.6	33.602	0.021	0.098	0.407	1HQ0_A	3.60.100.10.1.1
2	pgenthreader.4	33.751	0.024	0.107	0.440	1HX6_A	2.70.9.30.1.1 2.60.120.20.16.1
3	rpsblast.5	0.062	0.001	0.004	0.014	1QZV_U	N/A
4	ffas.4	-0.660E+01	0.022	0.062	0.224	1WIJ_A	1.10.3180.10.1.1
5	ffas.3	-0.701E+01	0.019	0.047	0.159	1XB2_B	N/A
6	pgenthreader.9	32.878	0.025	0.122	0.511	1YOE_A	N/A
7	ffas.2	-0.709E+01	0.013	0.009	-0.007	2BEQ_D	1.20.5.790.1.1
8	ffas.1	-0.949E+01	0.017	0.012	-0.006	2FXP_A	N/A
9	ffas.7	-0.582E+01	0.015	0.025	0.067	2L2N_A	N/A
10	rpsblast.1	3e-04	0.032	0.105	0.399	2PFF_B	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.