Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Wednesday, April 24 2024

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Submission

23572 : id:23563:1-33,190-278

Your submitted sequence: sequence (122 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: itasser
Queued at server: blast sam-t02 fugue lomets hhpred2

PMODELLER (only used 30 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	pgenthreader.10	22.939	0.057	0.079	0.169	1BPO_A	2.130.10.110.1.1 1.25.40.30.1.1
2	pgenthreader.9	23.848	0.043	0.061	0.133	1F6F_A	1.20.1250.10.24.1
3	ffas.7	-0.587E+01	0.041	0.017	-0.080	1HCD_A	N/A
4	ffas.6	-0.594E+01	0.059	0.061	0.067	1KR4_A	3.30.70.830.1.1
5	pgenthreader.3	25.218	0.038	0.043	0.064	1ND6_A	3.40.50.1240.8.1
6	rpsblast.5	1.8	0.026	0.021	0.002	1QZV_U	N/A
7	ffas.9	-0.578E+01	0.051	0.044	0.017	1WIJ_A	1.10.3180.10.1.1
8	ffas.5	-0.596E+01	0.051	0.043	0.012	1X1N_A	3.20.20.80.65.1
9	ffas.8	-0.578E+01	0.046	0.038	0.006	2AQE_A	N/A
10	rpsblast.9	18	0.034	0.030	0.016	2BEQ_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.