Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Wednesday, April 24 2024

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Submission

23570 : id:23565:1-23,121-381

Your submitted sequence: sequence (284 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: itasser
Queued at server: blast sam-t02 fugue lomets hhpred2

PMODELLER (only used 30 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.9	-0.705E+01	0.020	0.108	0.458	1GNG_A	3.30.200.20.23.1 1.10.510.10.20.1
2	pgenthreader.7	34.346	0.026	0.118	0.488	1O97_D	3.40.50.620.3.1 3.40.50.1220.11.1
3	pgenthreader.2	36.385	0.030	0.119	0.474	1QDM_A	N/A
4	rpsblast.6	0.045	0.006	0.003	-0.009	1QZV_U	N/A
5	pgenthreader.4	35.648	0.022	0.119	0.507	1X31_A	N/A
6	ffas.8	-0.708E+01	0.021	0.105	0.439	1YC1_A	3.30.565.10.1.1
7	ffas.3	-0.725E+01	0.025	0.108	0.438	2FWY_A	3.30.565.10.1.1
8	pgenthreader.1	38.552	0.027	0.108	0.431	2IMQ_X	N/A
9	pgenthreader.8	33.708	0.028	0.132	0.550	2NLK_A	N/A
10	rpsblast.1	8e-06	0.033	0.098	0.357	2PFF_B	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.