Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Friday, April 19 2024

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Submission

23569 : Guido Petrovich

Your submitted sequence: sequence (122 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast pgenthreader psipred ffas lomets itasser hhpred2

PMODELLER (only used 29 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	rpsblast.5	0.78	0.000	0.003	0.014	1QZV_U	N/A
2	ffas.10	-0.579E+01	0.018	0.081	0.335	1W66_A	N/A
3	ffas.3	-0.642E+01	0.013	0.049	0.195	1ZKR_A	N/A
4	pgenthreader.1	40.360	0.026	0.112	0.458	2H9F_A	N/A
5	ffas.8	-0.589E+01	0.013	0.052	0.210	2JOE_A	N/A
6	rpsblast.1	1e-05	0.023	0.073	0.272	2PFF_B	N/A
7	rpsblast.2	3e-05	0.011	0.063	0.272	2PFF_B	N/A
8	rpsblast.3	0.010	0.015	0.047	0.175	2PFF_B	N/A
9	rpsblast.4	0.78	0.011	0.005	-0.019	2PFF_B	N/A
10	rpsblast.8	1.2	0.009	0.023	0.077	2PFF_B	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.