Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Wednesday, April 17 2024

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Submission

23568 : maryam-7

Your submitted sequence: sequence (391 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2
Queued at server: sam-t02 fugue

PCONS (only used 30 models from 3 methods the score is NOT RELIABLE, models are sorted by Pcomb score)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	pgenthreader.3	40.836	0.023	0.122	0.520	3HRZ_D	N/A
2	pgenthreader.9	38.236	0.024	0.115	0.477	1T1E_A	3.40.50.200.6.1
3	pgenthreader.2	41.963	0.018	0.115	0.501	4AU9_A	N/A
4	rpsblast.1	5e-50	0.094	0.106	0.155	4FP5_G	N/A
5	pgenthreader.1	103.967	0.064	0.083	0.159	4FP5_D	N/A
6	pgenthreader.10	37.912	0.065	0.081	0.145	3CHB_D	2.40.50.110.1.1
7	pgenthreader.5	39.300	0.062	0.079	0.147	2WV6_G	N/A
8	pgenthreader.4	40.299	0.061	0.079	0.150	4L63_B	N/A
9	pgenthreader.7	18.037	0.009	0.079	0.357	4GT2_A	N/A
10	pgenthreader.6	39.161	0.062	0.078	0.143	1DJR_D	2.40.50.110.1.1

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.