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© Arne Elofsson

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23568 : maryam-7

Your submitted sequence: sequence (391 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2
Queued at server: sam-t02 fugue

PCONS (only used 30 models from 3 methods the score is NOT RELIABLE, models are sorted by Pcomb score)
RankModelMethod ScorePconsPcombProQ2ProQ / ProQresSumTemplateCATHAlignment
1
pgenthreader.3
40.8360.0230.1220.520 3HRZ_DN/A
2
pgenthreader.9
38.2360.0240.1150.477 1T1E_A3.40.50.200.6.1
3
pgenthreader.2
41.9630.0180.1150.501 4AU9_AN/A
4
rpsblast.1
5e-500.0940.1060.155 4FP5_GN/A
5
pgenthreader.1
103.9670.0640.0830.159 4FP5_DN/A
6
pgenthreader.10
37.9120.0650.0810.145 3CHB_D2.40.50.110.1.1
7
pgenthreader.5
39.3000.0620.0790.147 2WV6_GN/A
8
pgenthreader.4
40.2990.0610.0790.150 4L63_BN/A
9
pgenthreader.7
18.0370.0090.0790.357 4GT2_AN/A
10
pgenthreader.6
39.1610.0620.0780.143 1DJR_D2.40.50.110.1.1
 
References
Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.
 
 
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