Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Wednesday, April 24 2024

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Submission

23567 : maryam-6

Your submitted sequence: sequence (379 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2
Queued at server: sam-t02 fugue

PMODELLER (only used 30 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.6	-0.647E+01	0.053	0.074	0.157	1B44_D	2.40.50.110.1.1
2	pgenthreader.6	39.596	0.036	0.058	0.148	1DJR_D	2.40.50.110.1.1
3	ffas.1	-0.687E+02	0.054	0.076	0.163	1QB5_D	2.40.50.50.1.1
4	pgenthreader.8	39.072	0.019	0.092	0.385	1TA3_A	3.20.20.80.51.1
5	ffas.4	-0.685E+01	0.010	0.040	0.162	1WIJ_A	1.10.3180.10.1.1
6	ffas.9	-0.578E+01	0.006	0.029	0.119	1XB2_B	N/A
7	pgenthreader.4	15.218	0.000	-0.001	-0.004	1ZSQ_A	N/A
8	pgenthreader.5	15.218	0.018	0.109	0.473	1ZSQ_A	N/A
9	ffas.5	-0.672E+01	0.023	0.045	0.135	2A11_A	N/A
10	ffas.3	-0.696E+01	0.006	0.008	0.016	2BEQ_D	1.20.5.790.1.1

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.