Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Thursday, April 25 2024

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Submission

23566 : maryam-5

Your submitted sequence: sequence (379 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2
Queued at server: sam-t02 fugue

PMODELLER (only used 30 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.8	-0.532E+01	0.035	0.059	0.157	1B44_D	2.40.50.110.1.1
2	ffas.1	-0.664E+02	0.044	0.068	0.163	1QB5_D	2.40.50.50.1.1
3	pgenthreader.10	40.521	0.012	0.070	0.303	1RWI_A	2.120.10.30.5.1
4	ffas.6	-0.545E+01	0.006	0.034	0.144	1ZKR_A	N/A
5	ffas.5	-0.556E+01	0.021	0.042	0.127	2A11_A	N/A
6	pgenthreader.8	18.960	0.014	0.083	0.357	2H9F_A	N/A
7	pgenthreader.9	18.960	0.010	0.018	0.051	2H9F_A	N/A
8	rpsblast.2	2e-08	0.016	0.077	0.321	2PFF_B	N/A
9	rpsblast.3	7e-04	0.006	0.046	0.208	2PFF_B	N/A
10	rpsblast.4	0.044	0.005	0.012	0.038	2PFF_B	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.