Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Tuesday, April 23 2024

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Submission

23565 : maryam-4

Your submitted sequence: sequence (381 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2
Queued at server: sam-t02 fugue

PMODELLER (only used 30 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.6	-0.546E+01	0.013	0.084	0.366	1AR1_B	2.60.40.420.20.2 1.10.287.90.2.1
2	ffas.7	-0.539E+01	0.066	0.082	0.147	1B44_D	2.40.50.110.1.1
3	pgenthreader.4	39.630	0.025	0.050	0.149	1DJR_D	2.40.50.110.1.1
4	ffas.4	-0.572E+01	0.015	0.052	0.199	1K8K_F	3.30.1460.20.3.1
5	pgenthreader.10	38.201	0.027	0.054	0.164	1LTR_F	2.40.50.110.1.1
6	pgenthreader.7	18.591	0.007	0.021	0.078	1N4K_A	2.80.10.50.15.1 1.25.10.30.1.1
7	pgenthreader.8	18.591	0.017	0.073	0.297	1N4K_A	2.80.10.50.15.1 1.25.10.30.1.1
8	ffas.1	-0.627E+02	0.063	0.083	0.165	1QB5_D	2.40.50.50.1.1
9	ffas.10	-0.511E+01	0.012	0.076	0.333	2FWY_A	3.30.565.10.1.1
10	pgenthreader.2	46.695	0.022	0.095	0.385	2IMQ_X	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.