Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Thursday, April 25 2024

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Submission

23565 : maryam-4

Your submitted sequence: sequence (381 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2
Queued at server: sam-t02 fugue

PCONS (only used 30 models from 3 methods the score is NOT RELIABLE, models are sorted by Pcomb score)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	pgenthreader.2	46.695	0.022	0.095	0.385	2IMQ_X	N/A
2	rpsblast.1	7e-52	0.074	0.092	0.163	4FP5_G	N/A
3	pgenthreader.5	39.423	0.018	0.090	0.380	4BJ6_A	N/A
4	ffas.9	-0.520E+01	0.016	0.086	0.368	3K1U_A	N/A
5	ffas.6	-0.546E+01	0.013	0.084	0.366	1AR1_B	2.60.40.420.20.2 1.10.287.90.2.1
6	ffas.1	-0.627E+02	0.063	0.083	0.165	1QB5_D	2.40.50.50.1.1
7	ffas.7	-0.539E+01	0.066	0.082	0.147	1B44_D	2.40.50.110.1.1
8	ffas.10	-0.511E+01	0.012	0.076	0.333	2FWY_A	3.30.565.10.1.1
9	rpsblast.6	0.086	0.020	0.074	0.290	2PFF_B	N/A
10	ffas.8	-0.531E+01	0.011	0.074	0.325	2YE2_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.