Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Wednesday, April 24 2024

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Submission

23564 : maryam-3

Your submitted sequence: sequence (384 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2
Queued at server: sam-t02 fugue

PMODELLER (only used 30 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.1	-0.591E+02	0.132	0.143	0.187	1B44_D	2.40.50.110.1.1
2	ffas.5	-0.566E+02	0.132	0.145	0.197	1DJR_D	2.40.50.110.1.1
3	pgenthreader.2	96.456	0.142	0.153	0.197	1DJR_D	2.40.50.110.1.1
4	rpsblast.3	4e-60	0.170	0.175	0.193	1DJR_D	2.40.50.110.1.1
5	ffas.7	-0.564E+02	0.132	0.144	0.192	1LTR_D	2.40.50.110.1.1
6	pgenthreader.4	93.746	0.142	0.154	0.200	1LTR_F	2.40.50.110.1.1
7	pgenthreader.7	46.409	0.029	0.053	0.151	1O97_D	3.40.50.620.3.1 3.40.50.1220.11.1
8	pgenthreader.8	41.950	0.022	0.061	0.219	1VL4_A	N/A
9	pgenthreader.10	41.796	0.034	0.069	0.207	1X31_A	N/A
10	ffas.3	-0.569E+02	0.128	0.139	0.184	1XTC_D	2.40.50.110.1.1

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.