Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Friday, April 19 2024

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Submission

23563 : id:23562:1-21,125-381

Your submitted sequence: sequence (278 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2
Queued at server: sam-t02 fugue

PMODELLER (only used 30 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	ProQ / ProQresSum	Template	CATH
1	ffas.9	-0.553E+01	0.014	0.059	0.238	/ 0.000	1K8K_F	3.30.1460.20.3.1
2	ffas.6	-0.556E+01	0.028	0.100	0.390	/ 0.000	1TQ5_A	N/A
3	pgenthreader.5	38.189	0.019	0.082	0.333	/ 0.000	1UAI_A	2.60.120.200.2.1
4	ffas.3	-0.600E+01	0.017	0.062	0.240	/ 0.000	1WY6_A	N/A
5	ffas.4	-0.577E+01	0.011	0.048	0.198	/ 0.000	1ZKR_A	N/A
6	pgenthreader.9	37.102	0.019	0.079	0.321	/ 0.000	2GO2_A	N/A
7	pgenthreader.1	39.923	0.029	0.119	0.478	/ 0.000	2H9F_A	N/A
8	ffas.10	-0.550E+01	0.026	0.118	0.486	/ 0.000	2IOP_A	N/A
9	ffas.7	-0.556E+01	0.026	0.098	0.385	/ 0.000	2IOR_A	N/A
10	ffas.5	-0.561E+01	0.016	0.054	0.206	/ 0.000	2JOE_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.