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© Arne Elofsson

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23562 : samira-2

Your submitted sequence: sequence (381 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2
Queued at server: sam-t02 fugue

PMODELLER (only used 30 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)
RankModelMethod ScorePconsPcombProQ2ProQ / ProQresSumTemplateCATHAlignment
1
ffas.7
-0.766E+020.1350.1410.164 1B44_D2.40.50.110.1.1
2
ffas.4
-0.792E+020.1350.1440.182 1DJR_D2.40.50.110.1.1
3
pgenthreader.2
97.6840.1500.1560.182 1DJR_D2.40.50.110.1.1
4
rpsblast.3
1e-590.1770.1760.174 1DJR_D2.40.50.110.1.1
5
pgenthreader.10
40.4080.0280.0560.166 1F60_A3.40.50.300.16.2 2.40.30.10.7.2 2.40.30.10.1.1
6
ffas.10
-0.639E+010.0180.0350.101 1JP5_A2.60.40.10.20.1 2.60.40.10.38.2
7
ffas.6
-0.772E+020.1350.1420.172 1LTR_D2.40.50.110.1.1
8
pgenthreader.4
95.0890.1500.1510.156 1LTR_F2.40.50.110.1.1
9
ffas.8
-0.695E+010.0770.0820.101 1QB5_D2.40.50.50.1.1
10
ffas.1
-0.796E+020.1320.1410.175 1XTC_D2.40.50.110.1.1
 
References
Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.
 
 
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