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© Arne Elofsson

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23562 : samira-2

Your submitted sequence: sequence (381 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2
Queued at server: sam-t02 fugue

PCONS (only used 30 models from 3 methods the score is NOT RELIABLE, models are sorted by Pcomb score)
RankModelMethod ScorePconsPcombProQ2ProQ / ProQresSumTemplateCATHAlignment
1
rpsblast.1
7e-620.1770.1790.189 3CHB_G2.40.50.110.1.1
2
rpsblast.2
2e-600.1770.1770.176 4L63_EN/A
3
rpsblast.3
1e-590.1770.1760.174 1DJR_D2.40.50.110.1.1
4
rpsblast.4
4e-590.1550.1580.168 2WV6_JN/A
5
pgenthreader.2
97.6840.1500.1560.182 1DJR_D2.40.50.110.1.1
6
pgenthreader.1
102.2790.1500.1560.178 3CHB_D2.40.50.110.1.1
7
pgenthreader.3
96.7430.1480.1550.184 4L63_BN/A
8
pgenthreader.4
95.0890.1500.1510.156 1LTR_F2.40.50.110.1.1
9
ffas.2
-0.795E+020.1350.1450.184 2CHB_D2.40.50.110.1.1
10
ffas.4
-0.792E+020.1350.1440.182 1DJR_D2.40.50.110.1.1
 
References
Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.
 
 
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