Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Friday, April 26 2024

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Submission

23560 : sanam1

Your submitted sequence: sequence (382 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2
Queued at server: sam-t02 fugue

PMODELLER (only used 30 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.7	-0.751E+02	0.132	0.143	0.188	1B44_D	2.40.50.110.1.1
2	ffas.4	-0.791E+02	0.133	0.144	0.190	1DJR_D	2.40.50.110.1.1
3	pgenthreader.2	98.439	0.143	0.152	0.190	1DJR_D	2.40.50.110.1.1
4	rpsblast.3	7e-60	0.170	0.172	0.181	1DJR_D	2.40.50.110.1.1
5	ffas.10	-0.643E+01	0.016	0.028	0.074	1JP5_A	2.60.40.10.20.1 2.60.40.10.38.2
6	ffas.6	-0.760E+02	0.132	0.143	0.189	1LTR_D	2.40.50.110.1.1
7	pgenthreader.4	95.840	0.143	0.145	0.155	1LTR_F	2.40.50.110.1.1
8	rpsblast.10	0.41	0.011	0.009	0.000	1QZV_U	N/A
9	ffas.1	-0.797E+02	0.129	0.138	0.172	1XTC_D	2.40.50.110.1.1
10	ffas.5	-0.787E+02	0.133	0.142	0.177	2CHB_D	2.40.50.110.1.1

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.