Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Tuesday, April 23 2024

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Submission

23560 : sanam1

Your submitted sequence: sequence (382 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2
Queued at server: sam-t02 fugue

PCONS (only used 30 models from 3 methods the score is NOT RELIABLE, models are sorted by Pcomb score)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	rpsblast.3	7e-60	0.170	0.172	0.181	1DJR_D	2.40.50.110.1.1
2	rpsblast.2	1e-60	0.169	0.171	0.180	4L63_E	N/A
3	rpsblast.1	3e-62	0.169	0.171	0.177	3CHB_G	2.40.50.110.1.1
4	pgenthreader.2	98.439	0.143	0.152	0.190	1DJR_D	2.40.50.110.1.1
5	pgenthreader.1	103.030	0.143	0.152	0.186	3CHB_D	2.40.50.110.1.1
6	pgenthreader.3	97.491	0.141	0.151	0.192	4L63_B	N/A
7	rpsblast.4	2e-59	0.148	0.151	0.161	2WV6_J	N/A
8	pgenthreader.4	95.840	0.143	0.145	0.155	1LTR_F	2.40.50.110.1.1
9	ffas.4	-0.791E+02	0.133	0.144	0.190	1DJR_D	2.40.50.110.1.1
10	ffas.6	-0.760E+02	0.132	0.143	0.189	1LTR_D	2.40.50.110.1.1

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.