Pcons.net Protein Structure Prediction Meta Server Friday, December 4 2020
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© Arne Elofsson

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23560 : sanam1

Your submitted sequence: sequence (382 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2
Queued at server: sam-t02 fugue

PCONS (only used 30 models from 3 methods the score is NOT RELIABLE, models are sorted by Pcomb score)
RankModelMethod ScorePconsPcombProQ2ProQ / ProQresSumTemplateCATHAlignment
1
rpsblast.3
7e-600.1700.1720.181 1DJR_D2.40.50.110.1.1
2
rpsblast.2
1e-600.1690.1710.180 4L63_EN/A
3
rpsblast.1
3e-620.1690.1710.177 3CHB_G2.40.50.110.1.1
4
pgenthreader.2
98.4390.1430.1520.190 1DJR_D2.40.50.110.1.1
5
pgenthreader.1
103.0300.1430.1520.186 3CHB_D2.40.50.110.1.1
6
pgenthreader.3
97.4910.1410.1510.192 4L63_BN/A
7
rpsblast.4
2e-590.1480.1510.161 2WV6_JN/A
8
pgenthreader.4
95.8400.1430.1450.155 1LTR_F2.40.50.110.1.1
9
ffas.4
-0.791E+020.1330.1440.190 1DJR_D2.40.50.110.1.1
10
ffas.6
-0.760E+020.1320.1430.189 1LTR_D2.40.50.110.1.1
 
References
Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.
 
 
© 2006 Stockholm University, Stockholm Bioinformatics Center