Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Friday, April 26 2024

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Submission

23559 : William H. McCoy IV

Your submitted sequence: sequence (64 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2
Queued at server: sam-t02 fugue

PMODELLER (only used 30 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.2	-0.724E+01	0.022	0.025	0.035	1DCH_A	3.30.1360.20.1.1
2	rpsblast.5	4.6	0.040	0.017	-0.076	1DQI_B	2.60.40.730.1.1
3	pgenthreader.9	19.913	0.061	0.083	0.173	1FF3_A	3.30.1060.10.1.2
4	pgenthreader.3	15.455	0.047	0.059	0.109	1J0G_A	3.10.20.90.17.1
5	pgenthreader.4	15.455	0.052	0.028	-0.066	1J0G_A	3.10.20.90.17.1
6	pgenthreader.10	19.829	0.061	0.071	0.111	1JFR_A	3.40.50.1820.41.1
7	pgenthreader.1	13.954	0.067	0.073	0.095	1O04_A	3.40.605.10.1.1 3.40.309.10.2.1
8	pgenthreader.2	13.954	0.034	0.008	-0.094	1O04_A	3.40.605.10.1.1 3.40.309.10.2.1
9	rpsblast.1	0.10	0.045	0.039	0.017	1QZV_U	N/A
10	ffas.5	-0.698E+01	0.064	0.078	0.132	1RU0_A	3.30.1360.20.1.1

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.