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© Arne Elofsson

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23558 : SRSF6_SY

Your submitted sequence: sequence (35 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PMODELLER (only used 29 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)
RankModelMethod ScorePconsPcombProQ2ProQ / ProQresSumTemplateCATHAlignment
1
rpsblast.3
1.50.0000.0870.433 1FLC_B3.90.20.10.2.1
2
ffas.8
-0.338E+010.0000.1250.626 1GJI_AN/A
3
pgenthreader.1
24.9420.0000.1900.950 1QFX_AN/A
4
pgenthreader.6
22.6650.0980.1640.427 1RMJ_AN/A
5
pgenthreader.10
22.1710.0860.1920.615 1U3M_A1.10.790.10.3.1
6
rpsblast.2
1.30.1030.1500.336 1ZLG_AN/A
7
ffas.9
-0.337E+010.0860.1150.229 2A41_CN/A
8
pgenthreader.9
22.4480.0800.0960.159 2CRM_AN/A
9
pgenthreader.5
22.7230.0780.1340.359 2CUJ_AN/A
10
pgenthreader.4
22.7760.0980.1350.284 2EZE_AN/A
 
References
Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.
 
 
© 2006 Stockholm University, Stockholm Bioinformatics Center