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© Arne Elofsson

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23551 : CNR89173.1 UNCHARACTERIZED CONSERVED PROTEIN [NEISSERIA GONORRHOEAE]

Your submitted sequence: sequence (359 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PMODELLER (only used 30 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)
RankModelMethod ScorePconsPcombProQ2ProQ / ProQresSumTemplateCATHAlignment
1
pgenthreader.6
36.2350.0290.0510.140 1CP9_B3.60.20.10.20.1 2.30.120.10.1.1 1.10.1400.10.1.2
2
ffas.10
-0.875E+010.0220.0370.096 1GEF_A3.40.1350.10.2.1
3
ffas.6
-0.968E+010.0220.0370.097 1OB8_A3.40.1350.10.1.1
4
rpsblast.10
4.90.0060.001-0.019 1QZV_UN/A
5
rpsblast.5
0.140.0080.0100.016 1QZV_UN/A
6
pgenthreader.10
35.3070.0240.0730.270 1UUR_A1.20.58.240.1.1 2.60.40.340.3.1 1.10.238.10.28.1 3.30.505.10.18.1
7
ffas.4
-0.112E+020.0210.0370.100 1Y88_A3.40.91.40.1.1 1.10.150.20.10.1
8
ffas.9
-0.906E+010.0210.0340.088 2EO0_AN/A
9
pgenthreader.7
36.0560.0190.0260.054 2O3H_AN/A
10
rpsblast.2
2e-080.0260.0360.075 2PFF_BN/A
 
References
Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.
 
 
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