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© Arne Elofsson

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23550 : hendra

Your submitted sequence: sequence (546 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

rpsblast
RankModelMethod ScorePconsPcombProQ2ProQ / ProQresSumTemplateCATHAlignment
1 1e-1400.1760.1920.256 1G5G_AN/A
2 1e-1360.1420.1740.301 1ZTM_CN/A
3 8e-950.0960.1380.306 4DAG_AN/A
4 9e-190.0310.0320.036 2FYZ_AN/A
5 4e-180.0160.0150.012 1WP7_BN/A
6 1e-170.0270.0240.012 3N27_AN/A
7 1e-140.0140.0120.005 1WP7_BN/A
8 0.0160.0270.0240.011 3KPE_AN/A
9 0.0280.0160.0190.030 2PFF_BN/A
10 0.0480.0190.0190.017 2FYZ_DN/A
 
References
Marchler-Bauer A et al (2002) "CDD: a database of conserved domain alignments with links to domain three-dimensional structure." Nucleic Acids Res 30(1), 281-283. [LINK]
 
 
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