Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Thursday, April 25 2024

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Submission

23543 : id:23542:1-40,435-679

Your submitted sequence: sequence (285 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PMODELLER (only used 37 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.2	-0.102E+03	0.237	0.248	0.291	1BPR_A	N/A
2	ffas.1	-0.104E+03	0.430	0.451	0.533	1DKY_A	2.60.34.10.1.1 1.20.1270.10.1.1
3	ffas.10	-0.858E+02	0.269	0.263	0.240	1Q5L_A	2.60.34.10.1.1
4	ffas.4	-0.971E+02	0.418	0.447	0.563	1U00_A	2.60.34.10.1.2 1.20.1270.10.2.1
5	pgenthreader.10	95.551	0.331	0.349	0.421	1U00_A	2.60.34.10.1.2 1.20.1270.10.2.1
6	rpsblast.5	1e-37	0.361	0.404	0.575	1U00_A	2.60.34.10.1.2 1.20.1270.10.2.1
7	ffas.17	-0.202E+02	0.035	0.050	0.111	1UD0_A	N/A
8	ffas.12	-0.760E+02	0.402	0.398	0.382	1YUW_A	N/A
9	ffas.5	-0.929E+02	0.415	0.449	0.587	2KHO_A	N/A
10	ffas.18	-0.164E+02	0.049	0.078	0.194	2LMG_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.