Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Saturday, April 27 2024

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Submission

23540 : NAGLU

Your submitted sequence: sequence (719 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PMODELLER (only used 33 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	pgenthreader.3	69.146	0.043	0.088	0.268	1GQI_A	3.30.379.10.1.1 3.20.20.80.14.2 3.90.1330.10.1.1
2	ffas.4	-0.102E+02	0.061	0.094	0.225	1HP4_A	3.20.20.80.31.1 3.30.379.10.3.1
3	pgenthreader.2	69.705	0.086	0.132	0.318	1JAK_A	3.20.20.80.31.1 3.30.379.10.3.1
4	ffas.6	-0.101E+02	0.031	0.070	0.225	1KWG_A	3.20.20.80.21.1 3.40.50.880.7.1 2.60.40.1180.21.1
5	pgenthreader.7	59.155	0.065	0.120	0.341	1L8N_A	3.20.20.80.14.1
6	rpsblast.2	3e-22	0.079	0.103	0.198	1L8N_A	3.20.20.80.14.1
7	ffas.3	-0.114E+02	0.057	0.107	0.308	2EPK_X	N/A
8	pgenthreader.5	65.450	0.078	0.142	0.397	2EPL_X	N/A
9	ffas.8	-0.100E+02	0.060	0.094	0.229	2GJX_A	3.30.379.10.4.2 3.20.20.80.38.1
10	rpsblast.10	7e-04	0.007	-0.014	-0.100	2PFF_B	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.