Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Friday, April 19 2024

Main Menu

Submission

23538 : id:23537:1-31,163-456

Your submitted sequence: sequence (325 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PMODELLER (only used 40 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	pgenthreader.10	14.867	0.173	0.208	0.346	1B7F_A	3.30.70.330.12.2 3.30.70.330.9.2
2	ffas.13	-0.504E+02	0.130	0.158	0.272	1CVJ_A	3.30.70.330.17.1 3.30.70.330.16.1
3	ffas.16	-0.467E+02	0.087	0.140	0.351	1FJE_B	3.30.70.330.29.1 3.30.70.330.26.1
4	ffas.10	-0.512E+02	0.120	0.154	0.291	1FNX_H	3.30.70.330.12.1 3.30.70.330.9.1
5	ffas.9	-0.514E+02	0.130	0.140	0.179	1FXL_A	3.30.70.330.12.1 3.30.70.330.9.1
6	pgenthreader.7	60.096	0.171	0.204	0.338	1FXL_A	3.30.70.330.12.1 3.30.70.330.9.1
7	pgenthreader.5	22.633	0.118	0.166	0.357	1QM9_A	3.30.70.330.34.1 3.30.70.330.28.1
8	pgenthreader.6	22.633	0.006	0.008	0.018	1QM9_A	3.30.70.330.34.1 3.30.70.330.28.1
9	rpsblast.6	1e-07	0.116	0.122	0.147	1X4F_A	N/A
10	rpsblast.8	2e-07	0.128	0.132	0.149	1X4G_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.