Pcons.net Protein Structure Prediction Meta Server Friday, August 14 2020
Main Menu
Submission
Queue
About Pcons
About Pmodeller
About Pcons.net
Database status
Download




© Arne Elofsson

SciLifeLab Logotype nbis Logotype
SeRC Logotype Stockholm University logotype EGI logotype
23537 : NP_001005335.1 HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN L ISOFORM B [HOMO SAPIENS]

Your submitted sequence: sequence (456 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PCONS (only used 40 models from 3 methods the score is NOT RELIABLE, models are sorted by Pcomb score)
RankModelMethod ScorePconsPcombProQ2ProQ / ProQresSumTemplateCATHAlignment
1
pgenthreader.1
37.6570.1080.1540.339 3TYT_AN/A
2
rpsblast.10
2e-100.1120.1540.321 3TYT_AN/A
3
pgenthreader.3
51.9360.0970.1370.299 4CKO_AN/A
4
ffas.2
-0.828E+020.0670.1280.371 3TO8_AN/A
5
ffas.1
-0.832E+020.0650.1230.356 3S01_AN/A
6
ffas.5
-0.562E+020.0770.1160.272 2GHP_AN/A
7
ffas.6
-0.538E+020.0760.1160.274 3SMZ_AN/A
8
ffas.3
-0.664E+020.0450.1000.318 2ADC_AN/A
9
rpsblast.4
3e-130.0750.0980.190 2EVZ_AN/A
10
ffas.17
-0.437E+020.0800.0960.158 2E5I_AN/A
 
References
Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.
 
 
© 2006 Stockholm University, Stockholm Bioinformatics Center