Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Tuesday, April 23 2024

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Submission

23535 : DBD OF p53

Your submitted sequence: sequence (209 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PMODELLER (only used 37 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	pgenthreader.10	37.764	0.045	0.085	0.247	1IGT_B	2.60.40.10.32.2 2.60.40.10.8.1 2.60.40.10.29.2 2.60.40.10.18.1
2	ffas.14	-0.378E+02	0.268	0.309	0.472	1T4W_A	2.60.40.720.3.1
3	pgenthreader.9	79.577	0.228	0.276	0.469	1T4W_A	2.60.40.720.3.1
4	ffas.1	-0.117E+03	0.587	0.630	0.800	1TSR_A	2.60.40.720.1.1
5	ffas.4	-0.116E+03	0.592	0.628	0.772	1UOL_A	2.60.40.720.1.1
6	ffas.2	-0.117E+03	0.567	0.608	0.773	2BIQ_A	2.60.40.720.1.1
7	ffas.8	-0.115E+03	0.576	0.621	0.803	2GEQ_A	2.60.40.720.1.1
8	pgenthreader.4	141.808	0.581	0.617	0.759	2P52_A	N/A
9	rpsblast.5	2e-71	0.637	0.663	0.767	2P52_A	N/A
10	ffas.3	-0.116E+03	0.576	0.623	0.813	2PCX_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.