Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Saturday, April 20 2024

Main Menu

Submission

23535 : DBD OF p53

Your submitted sequence: sequence (209 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PCONS (only used 37 models from 3 methods the score is NOT RELIABLE, models are sorted by Pcomb score)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	rpsblast.1	4e-79	0.661	0.688	0.795	3ZME_A	N/A
2	rpsblast.2	6e-79	0.652	0.686	0.824	4KVP_D	N/A
3	rpsblast.3	2e-74	0.644	0.673	0.787	3D06_A	N/A
4	rpsblast.5	2e-71	0.637	0.663	0.767	2P52_A	N/A
5	rpsblast.6	9e-70	0.636	0.657	0.743	3US0_D	N/A
6	rpsblast.4	3e-72	0.623	0.656	0.787	2XWC_A	N/A
7	pgenthreader.5	141.457	0.591	0.645	0.863	3Q01_A	N/A
8	pgenthreader.1	148.505	0.600	0.643	0.814	3ZME_B	N/A
9	ffas.6	-0.115E+03	0.589	0.634	0.815	2XWR_A	N/A
10	ffas.1	-0.117E+03	0.587	0.630	0.800	1TSR_A	2.60.40.720.1.1

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.