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© Arne Elofsson

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23535 : DBD OF p53

Your submitted sequence: sequence (209 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PCONS (only used 37 models from 3 methods the score is NOT RELIABLE, models are sorted by Pcomb score)
RankModelMethod ScorePconsPcombProQ2ProQ / ProQresSumTemplateCATHAlignment
1
rpsblast.1
4e-790.6610.6880.795 3ZME_AN/A
2
rpsblast.2
6e-790.6520.6860.824 4KVP_DN/A
3
rpsblast.3
2e-740.6440.6730.787 3D06_AN/A
4
rpsblast.5
2e-710.6370.6630.767 2P52_AN/A
5
rpsblast.6
9e-700.6360.6570.743 3US0_DN/A
6
rpsblast.4
3e-720.6230.6560.787 2XWC_AN/A
7
pgenthreader.5
141.4570.5910.6450.863 3Q01_AN/A
8
pgenthreader.1
148.5050.6000.6430.814 3ZME_BN/A
9
ffas.6
-0.115E+030.5890.6340.815 2XWR_AN/A
10
ffas.1
-0.117E+030.5870.6300.800 1TSR_A2.60.40.720.1.1
 
References
Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.
 
 
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