Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Thursday, April 25 2024

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Submission

23533 : MUC18 Homo sapiens

Your submitted sequence: sequence (527 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PMODELLER (only used 40 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.16	-0.647E+02	0.090	0.132	0.302	1BIH_A	2.60.40.10.147.1 2.60.40.10.136.1 2.60.40.10.143.1 2.60.40.10.154.1
2	ffas.7	-0.694E+02	0.093	0.149	0.371	1CS6_A	2.60.40.10.28.1 2.60.40.10.75.1 2.60.40.10.47.1 2.60.40.10.71.1
3	pgenthreader.2	105.789	0.083	0.130	0.317	1CS6_A	2.60.40.10.28.1 2.60.40.10.75.1 2.60.40.10.47.1 2.60.40.10.71.1
4	ffas.2	-0.795E+02	0.064	0.109	0.291	1E07_A	N/A
5	ffas.18	-0.642E+02	0.077	0.126	0.322	1QZ1_A	2.60.40.10.57.1 2.60.40.10.66.1 2.60.40.10.78.1
6	pgenthreader.3	37.771	0.110	0.154	0.329	1QZ1_A	2.60.40.10.57.1 2.60.40.10.66.1 2.60.40.10.78.1
7	pgenthreader.4	37.771	0.021	0.027	0.049	1QZ1_A	2.60.40.10.57.1 2.60.40.10.66.1 2.60.40.10.78.1
8	rpsblast.6	5e-26	0.061	0.078	0.145	1UCT_A	2.60.40.10.103.1 2.60.40.10.37.4
9	ffas.12	-0.681E+02	0.062	0.117	0.335	1Z7Z_I	N/A
10	ffas.9	-0.692E+02	0.063	0.112	0.310	2EC8_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.