Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Thursday, April 25 2024

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Submission

23530 : id:23529:1-279,352-467

Your submitted sequence: sequence (395 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: lomets itasser

PCONS (only used 40 models from 3 methods the score is NOT RELIABLE, models are sorted by Pcomb score)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	rpsblast.1	1e-10	0.189	0.185	0.170	2IF5_A	N/A
2	rpsblast.3	1e-08	0.195	0.184	0.142	1BUO_A	3.30.710.10.6.1
3	ffas.4	-0.584E+02	0.162	0.180	0.251	3HQI_A	N/A
4	pgenthreader.4	58.439	0.179	0.180	0.182	4HXI_A	N/A
5	pgenthreader.2	67.388	0.162	0.179	0.246	3HQI_A	N/A
6	ffas.2	-0.687E+02	0.158	0.175	0.245	3HVE_A	N/A
7	pgenthreader.1	73.094	0.158	0.172	0.226	4J8Z_A	N/A
8	ffas.1	-0.688E+02	0.154	0.169	0.230	3HTM_A	N/A
9	pgenthreader.10	48.282	0.175	0.168	0.140	1BUO_A	3.30.710.10.6.1
10	pgenthreader.6	49.863	0.174	0.167	0.139	2VPK_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.