Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Saturday, April 20 2024

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Submission

23529 : Bop1

Your submitted sequence: sequence (467 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: itasser

PMODELLER (only used 40 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.18	-0.461E+02	0.102	0.103	0.107	1BU9_A	1.25.40.20.3.2
2	rpsblast.2	5e-17	0.106	0.102	0.084	1IKN_D	1.25.40.20.9.1
3	ffas.8	-0.486E+02	0.136	0.140	0.157	1K1A_A	1.25.40.20.6.1
4	ffas.4	-0.508E+02	0.143	0.147	0.164	1K3Z_D	1.25.40.20.6.2
5	pgenthreader.10	74.736	0.131	0.136	0.155	1N0R_A	1.25.40.20.5.1
6	pgenthreader.1	85.010	0.149	0.150	0.153	1N11_A	1.25.40.20.18.1
7	ffas.12	-0.479E+02	0.133	0.129	0.115	1OT8_A	1.25.40.20.1.1
8	ffas.2	-0.518E+02	0.142	0.143	0.147	1OY3_D	1.25.40.20.6.2
9	ffas.3	-0.509E+02	0.148	0.152	0.166	1QYM_A	1.25.40.20.7.1
10	ffas.9	-0.484E+02	0.126	0.117	0.079	1YCS_B	1.25.40.20.12.1 2.30.30.40.16.1

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.