Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Thursday, May 2 2024

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Submission

23523 : id:23522:210-375

Your submitted sequence: sequence (166 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PMODELLER (only used 40 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.9	-0.540E+02	0.473	0.492	0.570	1A17_A	N/A
2	pgenthreader.7	63.699	0.393	0.423	0.543	1A17_A	N/A
3	ffas.19	-0.399E+02	0.396	0.425	0.540	1ELR_A	1.25.40.10.7.1
4	ffas.10	-0.538E+02	0.428	0.442	0.496	1ELW_A	1.25.40.10.4.1
5	rpsblast.2	7e-09	0.435	0.437	0.444	1ELW_B	1.25.40.10.4.1
6	ffas.12	-0.508E+02	0.505	0.537	0.666	1IHG_A	2.40.100.10.1.2 1.25.40.10.2.1
7	pgenthreader.1	77.182	0.502	0.535	0.666	1IHG_A	2.40.100.10.1.2 1.25.40.10.2.1
8	rpsblast.4	3e-07	0.294	0.308	0.366	1IYG_A	1.25.40.10.10.1
9	ffas.5	-0.609E+02	0.508	0.532	0.628	1KT0_A	3.10.50.40.2.4 3.10.50.40.4.2 1.25.40.10.9.2
10	pgenthreader.4	70.790	0.485	0.524	0.678	1KT0_A	3.10.50.40.2.4 3.10.50.40.4.2 1.25.40.10.9.2

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.