Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Saturday, April 27 2024

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Submission

23521 : id:23520:1-30,143-327

Your submitted sequence: sequence (215 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PMODELLER (only used 40 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.10	-0.502E+02	0.371	0.381	0.423	1A17_A	N/A
2	pgenthreader.6	63.851	0.341	0.366	0.468	1A17_A	N/A
3	ffas.20	-0.374E+02	0.304	0.322	0.392	1ELR_A	1.25.40.10.7.1
4	ffas.13	-0.480E+02	0.345	0.362	0.432	1ELW_A	1.25.40.10.4.1
5	rpsblast.1	1e-13	0.380	0.381	0.387	1ELW_B	1.25.40.10.4.1
6	rpsblast.6	3e-12	0.260	0.255	0.237	1HXI_A	1.25.40.10.8.1
7	ffas.8	-0.527E+02	0.391	0.411	0.493	1IHG_A	2.40.100.10.1.2 1.25.40.10.2.1
8	pgenthreader.2	79.779	0.365	0.398	0.532	1IHG_A	2.40.100.10.1.2 1.25.40.10.2.1
9	ffas.5	-0.629E+02	0.397	0.434	0.580	1KT0_A	3.10.50.40.2.4 3.10.50.40.4.2 1.25.40.10.9.2
10	pgenthreader.4	77.196	0.369	0.394	0.493	1KT0_A	3.10.50.40.2.4 3.10.50.40.4.2 1.25.40.10.9.2

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.