Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Wednesday, April 24 2024

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Submission

23519 : FGF17threading

Your submitted sequence: sequence (194 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PMODELLER (only used 39 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	pgenthreader.10	67.806	0.551	0.514	0.365	1BFG_A	N/A
2	rpsblast.3	4e-32	0.470	0.446	0.348	1BFG_A	N/A
3	ffas.3	-0.658E+02	0.476	0.471	0.453	1BLA_A	N/A
4	pgenthreader.2	73.901	0.510	0.495	0.433	1BLA_A	N/A
5	ffas.7	-0.640E+02	0.503	0.473	0.353	1FGA_A	N/A
6	ffas.6	-0.643E+02	0.512	0.493	0.418	1IHK_A	2.80.10.50.21.1
7	pgenthreader.5	70.131	0.542	0.522	0.441	1IHK_A	2.80.10.50.21.1
8	ffas.2	-0.662E+02	0.517	0.490	0.383	1II4_A	2.80.10.50.1.2
9	pgenthreader.3	73.874	0.524	0.494	0.372	1IJT_A	2.80.10.50.7.2
10	rpsblast.5	9e-31	0.478	0.457	0.372	1IJT_A	2.80.10.50.7.2

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.