Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Saturday, April 27 2024

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Submission

23516 : pos

Your submitted sequence: sequence (334 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PMODELLER (only used 29 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	rpsblast.7	0.45	0.006	0.010	0.024	1A2P_B	3.10.450.30.3.1
2	rpsblast.3	0.097	0.009	0.012	0.025	1GOU_B	3.10.450.30.3.1
3	ffas.7	-0.661E+01	0.013	0.006	-0.020	1KDQ_B	2.40.10.10.29.1
4	rpsblast.9	3.1	0.010	0.012	0.020	1LNI_B	3.10.450.30.2.1
5	rpsblast.8	2.7	0.009	0.011	0.020	1MGR_A	3.10.450.30.2.1
6	rpsblast.6	0.24	0.010	0.016	0.041	1PYL_A	3.10.450.30.2.2
7	rpsblast.10	3.6	0.008	0.007	0.005	1QZV_U	N/A
8	pgenthreader.6	39.241	0.018	0.065	0.253	1RRK_A	N/A
9	ffas.9	-0.654E+01	0.011	0.029	0.103	1VES_A	N/A
10	ffas.1	-0.744E+01	0.012	0.026	0.083	1XMW_A	2.60.40.10.170.1 2.60.40.10.137.2

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.