Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Friday, April 26 2024

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Submission

23515 : Cyclin-O

Your submitted sequence: sequence (350 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PMODELLER (only used 39 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.5	-0.966E+02	0.367	0.391	0.487	1E9H_B	1.10.472.10.1.1 1.10.472.10.2.1
2	ffas.12	-0.843E+02	0.323	0.349	0.453	1F5Q_B	1.10.472.10.8.1 1.10.472.10.4.1
3	pgenthreader.9	71.360	0.325	0.346	0.428	1F5Q_B	1.10.472.10.8.1 1.10.472.10.4.1
4	rpsblast.4	3e-30	0.307	0.332	0.433	1F5Q_D	1.10.472.10.8.1 1.10.472.10.4.1
5	ffas.9	-0.891E+02	0.347	0.368	0.454	1G3N_C	1.10.472.10.9.1 1.10.472.10.12.1
6	rpsblast.1	9e-37	0.328	0.350	0.438	1G3N_C	1.10.472.10.9.1 1.10.472.10.12.1
7	rpsblast.9	2e-25	0.276	0.313	0.463	1JKW_A	N/A
8	ffas.8	-0.894E+02	0.326	0.354	0.464	1JOW_A	1.10.472.10.12.2 1.10.472.10.14.1
9	ffas.20	-0.385E+02	0.249	0.284	0.422	1KXU_A	N/A
10	ffas.3	-0.981E+02	0.368	0.394	0.500	1VYW_B	1.10.472.10.1.1 1.10.472.10.2.1

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.