Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Friday, April 26 2024

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Submission

23514 : p56542

Your submitted sequence: sequence (353 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PMODELLER (only used 30 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	rpsblast.7	0.35	0.007	0.010	0.022	1A2P_B	3.10.450.30.3.1
2	pgenthreader.6	38.319	0.025	0.061	0.203	1DOJ_A	2.40.10.10.34.1 2.40.10.10.11.1
3	ffas.8	-0.662E+01	0.020	0.075	0.295	1EO2_A	2.60.130.10.1.1
4	rpsblast.3	0.072	0.008	0.011	0.023	1GOU_B	3.10.450.30.3.1
5	ffas.7	-0.669E+01	0.014	0.058	0.236	1I04_A	2.40.128.20.5.1
6	rpsblast.9	2.3	0.010	0.012	0.018	1LNI_B	3.10.450.30.2.1
7	rpsblast.8	2.0	0.010	0.012	0.020	1MGR_A	3.10.450.30.2.1
8	rpsblast.6	0.18	0.010	0.016	0.038	1PYL_A	3.10.450.30.2.2
9	ffas.1	-0.881E+01	0.013	0.054	0.219	1QWD_A	2.40.128.20.14.1
10	pgenthreader.1	42.018	0.022	0.116	0.490	1RRK_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.