Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Friday, April 26 2024

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Submission

23512 : id:23511:1-51,247-657

Your submitted sequence: sequence (462 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PMODELLER (only used 30 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	pgenthreader.5	51.085	0.003	0.031	0.145	1D2P_A	2.60.40.1140.2.1 2.60.40.1140.1.1 2.60.40.1140.2.1 2.60.40.1140.1.1
2	rpsblast.9	12	0.005	0.009	0.026	1IIB_B	3.40.50.270.4.1
3	rpsblast.10	17	0.017	0.019	0.026	1NU9_C	N/A
4	rpsblast.3	0.006	0.004	0.001	-0.009	1QZV_U	N/A
5	pgenthreader.1	14.511	0.028	0.047	0.121	1W99_A	N/A
6	pgenthreader.2	14.511	0.001	-0.001	-0.007	1W99_A	N/A
7	ffas.9	-0.687E+01	0.008	0.009	0.015	1X79_B	N/A
8	ffas.5	-0.719E+01	0.013	0.023	0.064	2EFR_A	N/A
9	ffas.8	-0.691E+01	0.011	0.010	0.006	2NO2_A	N/A
10	ffas.7	-0.694E+01	0.013	0.014	0.017	2OCY_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.