Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Wednesday, April 24 2024

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Submission

23510 : id:23509:1-176,287-374

Your submitted sequence: sequence (264 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PMODELLER (only used 40 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	pgenthreader.7	29.970	0.005	0.030	0.132	1BG5_A	N/A
2	ffas.7	-0.254E+02	0.014	0.043	0.158	1C25_A	N/A
3	rpsblast.8	4.3	0.000	-0.001	-0.005	1F89_B	3.60.110.10.3.1
4	ffas.1	-0.285E+02	0.016	0.037	0.121	1GMX_A	3.40.250.10.5.1
5	ffas.11	-0.249E+02	0.013	0.023	0.064	1HZM_A	3.40.250.10.11.1
6	pgenthreader.8	29.893	0.011	0.014	0.024	1MV3_A	N/A
7	pgenthreader.10	14.939	0.028	0.043	0.105	1OQY_A	N/A
8	rpsblast.5	0.24	0.007	0.003	-0.012	1PN0_B	3.50.50.60.20.1 3.30.9.10.2.1 3.40.30.20.1.1
9	ffas.16	-0.242E+02	0.015	0.037	0.125	1QXN_A	3.40.250.10.12.1
10	ffas.13	-0.246E+02	0.014	0.026	0.075	1TQ1_A	3.40.250.10.14.1

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.