Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Friday, April 26 2024

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Submission

23509 : cep41(wt)

Your submitted sequence: sequence (374 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PMODELLER (only used 39 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.18	-0.363E+02	0.123	0.125	0.131	1C25_A	N/A
2	ffas.3	-0.414E+02	0.139	0.136	0.125	1GMX_A	3.40.250.10.5.1
3	pgenthreader.10	43.687	0.135	0.129	0.103	1GMX_A	3.40.250.10.5.1
4	ffas.6	-0.406E+02	0.123	0.115	0.085	1QXN_A	3.40.250.10.12.1
5	rpsblast.5	8e-10	0.099	0.095	0.080	1QXN_B	3.40.250.10.12.1
6	ffas.12	-0.383E+02	0.077	0.080	0.092	1T3K_A	3.40.250.10.13.1
7	ffas.2	-0.415E+02	0.078	0.078	0.080	1TQ1_A	3.40.250.10.14.1
8	rpsblast.2	7e-12	0.066	0.057	0.019	1TQ1_A	3.40.250.10.14.1
9	ffas.16	-0.370E+02	0.119	0.116	0.104	1VEE_A	N/A
10	rpsblast.1	4e-12	0.108	0.098	0.059	1VEE_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.