Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Saturday, April 20 2024

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Submission

23505 : 3blu

Your submitted sequence: sequence (305 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PMODELLER (only used 40 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	pgenthreader.4	19.000	0.392	0.429	0.579	1LAR_A	3.90.190.10.3.1 3.90.190.10.4.2
2	pgenthreader.5	19.000	0.005	0.002	-0.010	1LAR_A	3.90.190.10.3.1 3.90.190.10.4.2
3	rpsblast.1	1e-10	0.384	0.395	0.440	1LAR_A	3.90.190.10.3.1 3.90.190.10.4.2
4	rpsblast.8	4e-05	0.136	0.114	0.025	1LAR_A	3.90.190.10.3.1 3.90.190.10.4.2
5	ffas.2	-0.129E+03	0.298	0.406	0.837	1LYV_A	3.90.190.10.1.1
6	pgenthreader.1	14.345	0.382	0.473	0.837	1LYV_A	3.90.190.10.1.1
7	pgenthreader.2	14.345	0.008	0.006	-0.004	1LYV_A	3.90.190.10.1.1
8	rpsblast.2	3e-09	0.405	0.473	0.744	1LYV_A	3.90.190.10.1.1
9	rpsblast.10	5e-04	0.016	0.011	-0.009	1QZV_U	N/A
10	ffas.7	-0.982E+02	0.312	0.374	0.623	1YFO_A	3.90.190.10.3.2

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.