Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Tuesday, April 23 2024

Main Menu

Submission

23501 : cytochrome b

Your submitted sequence: sequence (380 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PCONS (only used 32 models from 3 methods the score is NOT RELIABLE, models are sorted by Pcomb score)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	rpsblast.4	4e-62	0.400	0.496	0.878	3CX5_N	N/A
2	ffas.4	-0.137E+03	0.400	0.494	0.871	1EZV_C	1.20.810.10.1.2
3	rpsblast.5	5e-60	0.398	0.494	0.878	3TGU_P	N/A
4	rpsblast.1	8e-67	0.398	0.491	0.864	1PPJ_P	1.20.810.10.1.1
5	ffas.3	-0.144E+03	0.388	0.485	0.875	1BCC_C	1.20.810.10.1.1
6	ffas.1	-0.146E+03	0.382	0.481	0.875	1BE3_C	1.20.810.10.1.1
7	ffas.7	-0.120E+03	0.377	0.474	0.864	2FYN_A	1.20.810.10.1.3
8	ffas.5	-0.123E+03	0.375	0.473	0.863	2YIU_A	N/A
9	ffas.6	-0.121E+03	0.370	0.467	0.853	1ZRT_C	1.20.810.10.1.3
10	rpsblast.7	1e-54	0.295	0.398	0.811	2YIU_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.