Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Wednesday, April 24 2024

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Submission

23498 : MyPep

Your submitted sequence: sequence (15 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: itasser

PMODELLER (only used 39 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.16	-0.695E+02	0.907	0.886	0.802	1A4F_B	1.10.490.10.3.3
2	ffas.7	-0.697E+02	0.894	0.873	0.787	1A9W_E	1.10.490.10.3.3
3	ffas.1	-0.709E+02	0.887	0.869	0.799	1DXT_B	1.10.490.10.3.1
4	ffas.6	-0.697E+02	0.874	0.856	0.785	1FDH_G	1.10.490.10.3.3
5	pgenthreader.6	93.122	0.918	0.898	0.817	1FHJ_B	1.10.490.10.3.1
6	ffas.10	-0.697E+02	0.908	0.886	0.799	1HBR_B	1.10.490.10.3.3
7	pgenthreader.1	97.780	0.889	0.873	0.810	1I3D_A	1.10.490.10.3.3
8	rpsblast.4	4.6	0.887	0.871	0.806	1I3D_B	1.10.490.10.3.3
9	ffas.19	-0.694E+02	0.879	0.862	0.794	1J7W_B	1.10.490.10.3.1
10	ffas.15	-0.695E+02	0.856	0.843	0.793	1JEB_B	1.10.490.10.3.1

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.